Insertion junction: CLIP2.059681_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059681
Chromosome:chromosome 17
Location:4951523
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735500 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGTGCCATGCTGTGTGAAACTGCAGCAAGGCGCCCTAAGCGACGGCA
Internal bar code:CCTTATTTAGTTTCATAAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1838
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTCCCTTGGCAATACCT
Suggested primer 2:TACTGCTGATGCTGCACCTC