Insertion junction: CLIP2.059686_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059686
Chromosome:chromosome 2
Location:7236585
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390986 TSD1 (1 of 1) PTHR22594//PTHR22594:SF5 - ASPARTYL/LYSYL-TRNA SYNTHETASE // ASPARTATE--TRNA LIGASE, MITOCHONDRIAL; Putative organellar aspartyl-tRNA synthetase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCCCTGCGGCACGGGAGCGCGGAGAGGGGACACGCGCACACACACAG
Internal bar code:CGGAGTCCGGAAGGGTCGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2866
LEAP-Seq percent confirming:91.0714
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTGCATTACGCTAGTGC
Suggested primer 2:AGTGTGACAAACAGGGGCAA