Insertion junction: CLIP2.059691_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059691
Chromosome:chromosome 5
Location:1140680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248300 NRAMP4 Manganese/metal transporter, NRAMP homolog; (1 of 1) K12347 - natural resistance-associated macrophage protein (SLC11A, NRAMP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTGCATGGATACTGAGCGAGTGCAGCCGATGCAAACTGCCATGCACG
Internal bar code:GCACTTACAGTACGAAGATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2625
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCATCCAGTCGTCCTCCA
Suggested primer 2:AGGATTTGGAGGAGGAGGGG