Insertion junction: CLIP2.059696_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059696
Chromosome:chromosome 6
Location:4938542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGATAGTCCTTAGCACGAGACATCCGACCCTGAATTCCGAGCCCTTGC
Internal bar code:GGCAAGCAACGTGGGGTGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3329
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGACACAACCATGACGGACT
Suggested primer 2:GGACTGTGTGGGTAAGTGGG