Insertion junction: CLIP2.059697_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059697
Chromosome:chromosome 16
Location:7631209
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684827 (1 of 4) PTHR11207//PTHR11207:SF0 - RIBONUCLEASE III // RIBONUCLEASE 3 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCAGTGGGCGCGGGGGCACCTGGGCGTGTCGGTGCGGGCAGTGGCGG
Internal bar code:GCAATACCTTCGCGCACGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1150
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AACCAGCGCACCTGTTCATA
Suggested primer 2:GAAACACGCCAACCTTTCCC