Insertion junction: CLIP2.059700_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059700
Chromosome:chromosome 12
Location:3530422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496500 PHC70 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) 5'UTR
Cre12.g496550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAACTGTCTGCGGTCAGTAACACAGCCTCATTGCGTGAAGCAGCGTCG
Internal bar code:ATGTTGGTACGTAAACCCGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4798
LEAP-Seq percent confirming:86.5672
LEAP-Seq n confirming:116
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:134

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGCGTGCTTTCTCATAC
Suggested primer 2:TGCAGAAGGTTAGGGCATGG