Insertion junction: CLIP2.059700_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059700
Chromosome:chromosome 12
Location:3530423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496500 PHC70 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) 5'UTR
Cre12.g496550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCAACGGAGCACTTGTCAGGCAAAAGTGTGCATGTCGCTCGGGGCGC
Internal bar code:GTAACAATGGACTGGGTCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1653
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGAAGGTTAGGGCATGG
Suggested primer 2:CGCTGCGTGCTTTCTCATAC