Insertion junction: CLIP2.059703_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059703
Chromosome:chromosome 1
Location:2682032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016200 MLO4 (1 of 5) PF03094 - Mlo family (Mlo); MLO family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGTGCAGTGCGCACGGGGGGACAGGGCTCCAGGTAGCCGTAGGCAGT
Internal bar code:GGTCAAAAGGGGGCAGGAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1386
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGGCTTTGATACCAGCA
Suggested primer 2:GGCTGTTGCACAGGAGGTAT