Insertion junction: CLIP2.059704_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059704
Chromosome:chromosome 16
Location:4709475
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667100 LMR3 (1 of 1) PTHR20932//PTHR20932:SF9 - LOC443603 PROTEIN-RELATED // SUBFAMILY NOT NAMED; Predicted protein with LysM domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCTTTACCCCTTTACTTCCACGTTGTGGCGCGTGTGCGTGTCTGTGG
Internal bar code:AGGATAGCTGCGAAAAAGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5068
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCCTCAAGCACGCTTAA
Suggested primer 2:CTGCTGCAGTTCGTTCACAC