Insertion junction: CLIP2.059706_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059706
Chromosome:chromosome 17
Location:5968347
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g742350 (1 of 71) IPR016181 - Acyl-CoA N-acyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTCAAGAAACTGAAACATATGTCCCCATCGCGCGCATGCGTGGCCAT
Internal bar code:TTGCATGAGTTGCGCCCGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1784
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCTCCCGTATTCAACAC
Suggested primer 2:CCACGTCAAAGTCGTCTCCA