Insertion junction: CLIP2.059706_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059706
Chromosome:chromosome 17
Location:5968352
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g742350 (1 of 71) IPR016181 - Acyl-CoA N-acyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCATTAATCAACAAATAATGCCCAATACGGACAAGCGCGCAGCCGATGA
Internal bar code:TTGCATGAGTTGCGCCCGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1628
LEAP-Seq percent confirming:5.12821
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:74
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGTCAAAGTCGTCTCCA
Suggested primer 2:TGGCCTCCCGTATTCAACAC