Insertion junction: CLIP2.059707_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059707
Chromosome:chromosome 17
Location:1187489
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704550 HRF1 (1 of 1) PTHR14083:SF0 - PROTEIN YIF-1, ISOFORM B; HRF1 homolog 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGCCCTCCGCGCCTACCTCTCCAGTCCCAGCCCGCCATCATGCCCAC
Internal bar code:CTCATGATGTTGCTTGGCAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:715
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCACTCACCCTCCTCA
Suggested primer 2:CGTCAGCCATGCCTAATTGC