Insertion junction: CLIP2.059711_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059711
Chromosome:chromosome 3
Location:2056959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156100 (1 of 1) K11984 - U4/U6.U5 tri-snRNP-associated protein 1 (SART1, HAF, SNU66) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAAAGATAACGATCAGAGCTCCGCAGCGTTGATAGGGAAGCGACAGC
Internal bar code:AGATGAAGGACGTCTACGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1364
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACCACCTGTCACACATA
Suggested primer 2:ACTGCCATTAGCCGCTGAAT