Insertion junction: CLIP2.059712_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059712
Chromosome:chromosome 16
Location:1058323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649400 RRM15,CPLD16 Putative RNA methyl transferase; (1 of 1) PTHR11061:SF12 - RNA BINDING PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGGACTCCTTTCCACACACCGAATCATCACAGCAGGCGCAGCGTGAG
Internal bar code:TACTGGTTGGCGTAGAGGCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2519
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACTGAACTTGCCGTGGG
Suggested primer 2:TGAACTCTTGTCGGCACTCC