Insertion junction: CLIP2.059715_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059715
Chromosome:chromosome 12
Location:3250317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499451 (1 of 1) PTHR14089//PTHR14089:SF2 - CELL CYCLE CONTROL PROTEIN // PRE-MRNA-SPLICING FACTOR CWC2 5'UTR
Cre12.g499500 SAC3,SNRK2B snRK1 family in Chlamydomonas, subgroup 2; (1 of 1) PTHR24343:SF207 - SERINE/THREONINE-PROTEIN KINASE SRK2C 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGGTTAACTGTCACTTGTTGGAGCTAGTGACGCGAACCCACGACCGG
Internal bar code:GGGGTAGAATGCCGCACAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3164
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACACCAGGTTCGCCAAG
Suggested primer 2:GTAGAGGCAGAACACGTGCT