Insertion junction: CLIP2.059716_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059716
Chromosome:chromosome 7
Location:4405530
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g343101 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGTTGCTTATATGCCGGTGCCGTATCGCAAATTCAAACTAACTAGTAT
Internal bar code:TTCGGAAATCTATATCGCAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:540
LEAP-Seq percent confirming:10.5263
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGCCGCCATTTCTTTT
Suggested primer 2:CCTCGGGAGCCATTGTTTCT