Insertion junction: CLIP2.059723_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059723
Chromosome:chromosome 14
Location:2614447
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g625225 (1 of 1) IPR007577//IPR016024//IPR029044 - Glycosyltransferase, DXD sugar-binding motif // Armadillo-type fold // Nucleotide-diphospho-sugar transferases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCCACCTCGCATCCGATGAAGTCATCAACATTCAACACGCCGTCGTT
Internal bar code:ATAATGATATGCAAGTAACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:181
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACAAGGTGTACCGCTCC
Suggested primer 2:TACCTCGGATTGGTGTGCAC