Insertion junction: CLIP2.059724_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059724
Chromosome:chromosome 11
Location:1916118
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g801286 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAATCCTTGTTCCCGACCAAGCGTGAGCCGCTCCAGTCCACCGGTGTGC
Internal bar code:ATAGTCGTCCGTATGTTTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1162
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAGTGCTTGAATTGGGG
Suggested primer 2:ATCTTGGGAATGCTGCAGCT