Insertion junction: CLIP2.059731_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059731
Chromosome:chromosome 3
Location:8857976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205809 (1 of 1) PF01367//PF02739 - 5'-3' exonuclease, C-terminal SAM fold (5_3_exonuc) // 5'-3' exonuclease, N-terminal resolvase-like domain (5_3_exonuc_N) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGACCTGTCACAGCTCGGAGAGTCCGCGGCGCAGCCCCTATGCACTGC
Internal bar code:GGCGAGAATGGTGTGGGGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1827
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGGGGTGGAGTCTGAG
Suggested primer 2:GTTTGCTTGTGTGGCCTGAG