Insertion junction: CLIP2.059734_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059734
Chromosome:chromosome 1
Location:8086332
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g063997 (1 of 1) PF06741//PF14438 - LsmAD domain (LsmAD) // Ataxin 2 SM domain (SM-ATX) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGTCACCGGGTGTGCCCGGGAGGATTGGAATTGCTAACGGCGCGTGCT
Internal bar code:AGTGCGATGTTAGTTCACAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1488
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCAAATCCTCCAGATGCA
Suggested primer 2:CACACGCTACTAGGGCACAA