Insertion junction: CLIP2.059742_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059742
Chromosome:chromosome 6
Location:3146750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275700 HFO4,HFO3 (1 of 33) K11254 - histone H4 (H4); Histone H4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATCCAAAACTCGGTGTTTCTCAACACCACCCTGCCACATGGTTGCGA
Internal bar code:ATCATGCATATTACGCTGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1106
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GACACGATAAGCTAGCGCCT
Suggested primer 2:ATTTGTACCCAGTGGCCCAG