Insertion junction: CLIP2.059743_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059743
Chromosome:chromosome 12
Location:1282099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489550 3'UTR
Cre12.g489600 (1 of 3) IPR003029//IPR012340//IPR022967 - S1 domain // Nucleic acid-binding, OB-fold // RNA-binding domain, S1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGAAGACTCAGAGATGGGCCACGGGCCTGGATGTAACCACATACGGT
Internal bar code:CTGTACTCGTCTGGTCGTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:604
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGAACCCCATCGCATGC
Suggested primer 2:GGCGTTCATGTGAGTGGAGA