Insertion junction: CLIP2.059745_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059745
Chromosome:chromosome 13
Location:2136112
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g577500 VTI1 (1 of 1) K08493 - vesicle transport through interaction with t-SNAREs 1 (VTI1); Endosomal Qb-SNARE, Vti1-family (Qb.III.b) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGGTGAACCGTGCGAGGGACAAGGCCAGACGCGCATGAGCCGATTCC
Internal bar code:TATTTGGAGGTTGTCACCCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:686
LEAP-Seq percent confirming:2.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGTGCGGTTGACAGGAT
Suggested primer 2:AGTATGCTGGCACCTTCCAC