Insertion junction: CLIP2.059751_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059751
Chromosome:chromosome 16
Location:3907010
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801947 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAGTACAAGCAAGAGCAGGTGATGAGAAGCACAACGCCGAGTGTGATG
Internal bar code:GAGTGTGTATGTTTGTTGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1233
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTGTTTCCTACCCCCTC
Suggested primer 2:CAATCTGCGCCTGGAATTCG