Insertion junction: CLIP2.059752_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059752
Chromosome:chromosome 17
Location:2005119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710650 PTK21 (1 of 7) 2.7.10.2//2.7.12.1 - Non-specific protein-tyrosine kinase / Cytoplasmic protein tyrosine kinase // Dual-specificity kinase; Protein tyrosine kinase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAAAGCAGTGTATAATGTACGCGAGGCCGCTCGGACCGTTGGCGTGT
Internal bar code:ACTTATCCGCTAAAGCTAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1737
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCTGTTTCTGCGTCTTG
Suggested primer 2:AAAAAGAAACGAAGGCCCGC