Insertion junction: CLIP2.059756_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059756
Chromosome:chromosome 17
Location:6892266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g747747 (1 of 18) PF12906 - RING-variant domain (RINGv) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCCGCATACAGGGGGCATTTTGTTACTTGGTTACAGAAGGACTCGTT
Internal bar code:TGTGTCTGTTTCCAAAAGTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1900
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GATGAGTAGTGAGTCGGCGG
Suggested primer 2:GGTTTTGTCGCAGCATGGAG