Insertion junction: CLIP2.059774_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059774
Chromosome:chromosome 3
Location:1772051
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153800 GPI8,PIGK1,PIGK (1 of 1) K05290 - phosphatidylinositol glycan, class K (PIGK); GPI transamidase subunit K 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGCTTTTCGGGGTATTCCCGCGCTTACAGGCTTCTCTGTACAGTTAT
Internal bar code:CTTGCTTTTAATTACGCTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1223
LEAP-Seq percent confirming:9.30233
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGGGACTGGTTCACGAG
Suggested primer 2:ATACAACTGCTCCACCAGGC