Insertion junction: CLIP2.059781_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059781
Chromosome:chromosome 1
Location:6068966
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042900 RRM1 Putative rRNA (adenine-N6-)-methyltransferase; (1 of 1) 2.1.1.183 - 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTAAGTAAGCTATCTGCCAAGCCTAGCGCCTATGATAAATGACATTCG
Internal bar code:TTAACTTAGTACGTTAGAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3175
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:113
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCAGGTTGTTACCCCTC
Suggested primer 2:TCGGCTTCCATTGGCAGATT