Insertion junction: CLIP2.059785_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059785
Chromosome:chromosome 17
Location:2248405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g713051 (1 of 62) PF00226 - DnaJ domain (DnaJ) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCGAGGGCAGCGCATTTGCTGGGAGAGATTTAAAGAGGATCCTAGAGT
Internal bar code:CTGTTACTAAGGTGTTGGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3623
LEAP-Seq percent confirming:64.1509
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCAACAAAACGCGTCAGC
Suggested primer 2:TGCTCATGCTGTGTTAGGCA