Insertion junction: CLIP2.059801_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059801
Chromosome:chromosome 16
Location:2840405
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g662800 PRP4 (1 of 1) K12662 - U4/U6 small nuclear ribonucleoprotein PRP4 (PRPF4, PRP4); Splicing factor, component of the U4/U6-U5 snRNP complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAATGTACACAATGTGACTAAATATGTGGACGCACGCTAAGCCATGA
Internal bar code:GTAAAGGTGCCGTGGCGAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:454
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTACATCCCATGCTGCAA
Suggested primer 2:CTCAGGTCCCTCCGTGTAGA