Insertion junction: CLIP2.059812_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059812
Chromosome:chromosome 3
Location:3923961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171000 (1 of 1) IPR003072//IPR006569//IPR008942 - Orphan nuclear receptor, NOR1 type // CID domain // ENTH/VHS 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGTACGCGCTTGCCCCTCAGCCCCCAACCCGGGTCTTTTGCAACCAT
Internal bar code:CTGTCGATATTTGTTGCTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2045
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGCAAAACCGTGCAATA
Suggested primer 2:TAGAGGAGGTGGAGCTTCCC