Insertion junction: CLIP2.059812_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059812
Chromosome:chromosome 3
Location:3923963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171000 (1 of 1) IPR003072//IPR006569//IPR008942 - Orphan nuclear receptor, NOR1 type // CID domain // ENTH/VHS 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGATCAGCTGACCCAACATGTCGTGGCCAACTCGTAGTCCCCGACCAG
Internal bar code:CTAAATTAGAGAAAGTCCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1313
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TAGAGGAGGTGGAGCTTCCC
Suggested primer 2:CGTGGCAAAACCGTGCAATA