Insertion junction: CLIP2.059813_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059813
Chromosome:chromosome 17
Location:5512781
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g802118 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGAACATCATATGGACGAACGCAATTGTAAGCTTAAGAGCACGCCCC
Internal bar code:CGACGTGATAAGTAAGTAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:896
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCGTGTTCATTTGGCGTT
Suggested primer 2:TGCCTTGGTATCAGCCTTGG