Insertion junction: CLIP2.059828_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059828
Chromosome:chromosome 16
Location:281672
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694200 MMP15 Matrix-metalloproteinase-like protein; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCTAATGATGTGATGTTACTTGCCATGGCTTGATGTTGAGAGTGTGT
Internal bar code:GGCCTGAACTGCTATGTTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:979
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGACATGCTGCAAAACC
Suggested primer 2:GAGTGGGAGCAGTGCTGATT