Insertion junction: CLIP2.059828_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059828
Chromosome:chromosome 16
Location:281674
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694200 MMP15 Matrix-metalloproteinase-like protein; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCACGAAATAACTGGCCGGCGCCGCCATAGGACAGGCCGCACCGCTC
Internal bar code:GGCCTGAACTGCTATGTTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:165
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGGGAGCAGTGCTGATT
Suggested primer 2:ACACGACATGCTGCAAAACC