Insertion junction: CLIP2.059829_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059829
Chromosome:chromosome 6
Location:4232537
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278248 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGGCATCAGCCAGCAGGTCCCGGTCTGGAAAGGTCCTTGTCCCGCCT
Internal bar code:ATTGGGCTATCTTCCATTCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5032
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTAGCAGTAGGGCTAGC
Suggested primer 2:CGCTACTGCCACCATCTTCA