Insertion junction: CLIP2.059829_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059829
Chromosome:chromosome 6
Location:4232538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278248 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGCAACACGCCGTTTACTTCACGGTGGTAATTCCCAAGTTTATGTGA
Internal bar code:ATTGGGCTATCTTCCATTCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1319
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTACTGCCACCATCTTCA
Suggested primer 2:GCAGTAGCAGTAGGGCTAGC