Insertion junction: CLIP2.059834_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059834
Chromosome:chromosome 3
Location:6423915
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192900 OPR17 (1 of 4) PTHR11584//PTHR11584:SF377 - SERINE/THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED; OctotricoPeptide Repeat protein 17 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTAGACATTCCTTCCAGGAGCTAATGTCTGGGGCGAGACTTTGTTGGC
Internal bar code:TGTTATTTATAGCGGTGAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:947
LEAP-Seq percent confirming:79.6296
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCAATAAGGGCCCGCAAT
Suggested primer 2:TCACGCGAGACTATCATGCC