Insertion junction: CLIP2.059837_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059837
Chromosome:chromosome 12
Location:8685520
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g547800 SNE15 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; NAD dependent epimerase/dehydratase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGCGTGCCACCTTCGTTGACGTATTACTCGAAAACGTAGCTGAATAA
Internal bar code:AATATTCAGACAATAATTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3847
LEAP-Seq percent confirming:92.0792
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGCATGCGGGGGATGATG
Suggested primer 2:TGCCGAAATGGTGTCCTCTC