Insertion junction: CLIP2.059844_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059844
Chromosome:chromosome 12
Location:9520197
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540250 SELW1,SELENOW1 Selenoprotein W1; (1 of 3) IPR011893//IPR012336 - Selenoprotein, Rdx type // Thioredoxin-like fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGATAACGCTTGCTCGCTTCAACGCTCAAGTCACTAGCGCCCCCCGCC
Internal bar code:TGTACACTGAACAAAAGAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1549
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGACGAGACTTGCCCAC
Suggested primer 2:CGGCTTTGCGTTTCTTGTCA