Insertion junction: CLIP2.059848_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059848
Chromosome:chromosome 13
Location:2486304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579800 (1 of 1) 2.7.4.26 - Isopentenyl phosphate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCGTCCTCCCGTCCTGTGTCCGAGAACCCTCCGCTCCCGCGGTCTCGC
Internal bar code:CAGTGTATTTTTGGTTTTACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:643
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAATGGCGGCTTTGTTCC
Suggested primer 2:CAAGCTCAGATACCGCGCTA