Insertion junction: CLIP2.059850_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059850
Chromosome:chromosome 9
Location:439928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre18.g749447 AHD1 (1 of 2) K12524 - bifunctional aspartokinase / homoserine dehydrogenase 1 (thrA); Bifunctional aspartate kinase/homoserine dehydrogenase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTACGCTCTTATAGCATTTGTGGGAGTCTCCACATTAGCGACAGTCAAC
Internal bar code:CGTGGTTGCGAGTGATGCTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:547
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCTTCCTTATGCCATGC
Suggested primer 2:CGTCGCTATGAGAGTGTCCC