Insertion junction: CLIP2.059851_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059851
Chromosome:chromosome 9
Location:945980
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g800990 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATTGCTGTTTGGTTGATTGCTCGCTGTGCTTGTGCTTGGCAGCGGGGC
Internal bar code:AAGGTACTGTTGCGGGGATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2810
LEAP-Seq percent confirming:46.8085
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:AACCGTCAACATCACCCCTC
Suggested primer 2:GTCGCCATCAAATACGCCAC