Insertion junction: CLIP2.059852_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059852
Chromosome:chromosome 6
Location:6311308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292900 (1 of 10) PTHR12270:SF6 - GLYCOSYLTRANSFERASE-LIKE PROTEIN LARGE 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGAATCAGATACTGCCCTAACTTACCTCTCTACCTTCCACACACACCA
Internal bar code:CGCGTATTTTCATAGTTTTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1140
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCAGTCTTGATTGGAGC
Suggested primer 2:TGCGCAATGACAAATGGCAA