Insertion junction: CLIP2.059859_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059859
Chromosome:chromosome 10
Location:624082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421850 (1 of 1) PTHR13542:SF0 - PROTEIN LSM12 HOMOLOG 3'UTR
Cre10.g421900 SRR27 Scavenger receptor cysteine rich (SRCR) protein; (1 of 5) 1.4.3.13 - Protein-lysine 6-oxidase / Lysyl oxidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTATATGTTTGCATGCCGCCAGCTGGGTCTGTGCACACCACAGAGGCAC
Internal bar code:TTCACAGCGTTTTAAGCAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2869
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGACGTCTTTGGGACTGA
Suggested primer 2:CGGTTAGTCTCGTTGCAGGT