Insertion junction: CLIP2.059860_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059860
Chromosome:chromosome 10
Location:5632526
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458800 SRR31 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAATTCATCTAGTTGTCCATATTATTAAGGGGGCGAGGGCGGGTTGCCC
Internal bar code:TCCGTGCGGGTCGGGGAAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1952
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTTTCCTATGTTCGGGGC
Suggested primer 2:GCGGTGTGAGGGGGTATATG