Insertion junction: CLIP2.059863_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059863
Chromosome:chromosome 9
Location:2337757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGAAGTGCGCGGCAGATTTTCGTTTTTGCAGGAGTTGTGCGCGCGGTT
Internal bar code:GGTCATGGCCCGGCATGCCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2360
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCTATGCGTGCTAGCGA
Suggested primer 2:TGGAGTCAAGTCGCTGCTTT