Insertion junction: CLIP2.059866_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059866
Chromosome:chromosome 11
Location:2555160
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095095 PHC12 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 12 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTAAAGACAGAAAGCCGAGTGCGCAGCTTTTGCAAGCACTCTTCGTAC
Internal bar code:CTACTTTTGGGCGTGCTTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1659
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGTCTGGTCTTGTGTGTA
Suggested primer 2:CGCCGCATTGTATGTGAGTG