Insertion junction: CLIP2.059872_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059872
Chromosome:chromosome 3
Location:6356000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192400 (1 of 1) IPR013769 - Band 3 cytoplasmic domain 3'UTR_intron
Cre03.g192450 CYA3 Adenylate cyclase; (1 of 70) 4.6.1.1 - Adenylate cyclase / ATP pyrophosphate-lyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAAAGCGGGCTGCGGAGCCACACAGTGAACCCAAAACAAGTCCACCCA
Internal bar code:CTTAAAAATACCCATTCCTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4657
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCTCTACCTTTCGATCC
Suggested primer 2:CGGAGGAGACATTCGATCCG