Insertion junction: CLIP2.059875_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059875
Chromosome:chromosome 8
Location:3241520
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377050 (1 of 1) 4.6.1.14 - Glycosylphosphatidylinositol diacylglycerol-lyase / VSG-lipase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGGAAATGTGGAGCCGGCCATAGTTCTTGCACGCTCGCGCGCAGGCG
Internal bar code:ACCATAGATTGAGTGGTAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1612
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTGCAAGGCGCTTAGAA
Suggested primer 2:GGTGCTGTAGCTGCAGGTAG